CRISPRone

CRISPRone report for GCA_900147835.1_201_1

♦ Seq 1: FRUY01000050.1 Pseudomonas aeruginosa isolate 201.1 genome assembly, contig: 201_1.NODE_65_length_97031_cov_49.073524, whole genome shotgun sequence

⇒Summary: seq-len = 97081 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32340-42925 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 32340-33884 bp Gene: unk Type: unknown Location: 34968-35147 bp Gene: unk Type: unknown Location: 35331-35729 bp Gene: pfam00078:RT Type: other Location: 35879-37147 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 42056-42925 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRUY01000131.1 Pseudomonas aeruginosa isolate 201.1 genome assembly, contig: 201_1.NODE_280_length_311711_cov_49.231003, whole genome shotgun sequence

⇒Summary: seq-len = 311761 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111674-132308 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 111674-114040 bp Gene: unk Type: unknown Location: 114433-115080 bp Gene: unk Type: unknown Location: 115146-115433 bp Gene: pfam13280:WYL Type: other Location: 115564-116439 bp Gene: unk Type: unknown Location: 116454-116987 bp Gene: unk Type: unknown Location: 117044-117475 bp Gene: unk Type: unknown Location: 117793-118671 bp Gene: pfam13280:WYL Type: other Location: 119278-120297 bp Gene: cd09637:cas4 Type: other Location: 127099-129750 bp Gene: unk Type: unknown Location: 129758-130324 bp Gene: unk Type: unknown Location: 130360-131232 bp Gene: pfam13280:WYL Type: other Location: 131565-132308 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRUY01000065.1 Pseudomonas aeruginosa isolate 201.1 genome assembly, contig: 201_1.NODE_89_length_71229_cov_44.232208, whole genome shotgun sequence

⇒Summary: seq-len = 71279 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36359-47520 bp Zoom in on locus 1 x11 x33 CRISPR array Location: 36359-36987 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 36359-36987 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09739:cas6f Type: other Location: 37171-37734 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37738-38766 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 38777-39760 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39747-41051 bp Gene: COG1203:cas3 Type: Type-I Location: 41109-44339 bp Gene: cd09718:cas1 Type: universal Location: 44336-45310 bp CRISPR array Location: 45572-47520 bp Num of repeats: 33 Spacers: s11-s42 CRISPR array Location: 45572-47520 bp Num of repeats: 33 Spacers: s11-s42 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36359-36987 bp]: array | spacers
           [Locus range 45572-47520 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)