CRISPRone

CRISPRone report for GCA_900147935.1_410_1

♦ Seq 1: FRVL01000105.1 Pseudomonas aeruginosa isolate 410.1 genome assembly, contig: 410_1.NODE_110_length_37650_cov_35.580265, whole genome shotgun sequence

⇒Summary: seq-len = 37704 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8262-18835 bp Zoom in on locus 1 x9 x14 CRISPR array Location: 8262-8780 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 8262-8780 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 9553-12234 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 12237-13805 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 13802-14332 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 14342-15484 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 15486-16148 bp Gene: pfam08798:cas6e Type: other Location: 16123-16734 bp Gene: cd09719:cas1 Type: universal Location: 16761-17651 bp Gene: pfam09707:cas2 Type: universal Location: 17648-17947 bp CRISPR array Location: 18012-18835 bp Num of repeats: 14 Spacers: s9-s21 CRISPR array Location: 18012-18835 bp Num of repeats: 14 Spacers: s9-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8262-8780 bp]: array | spacers
           [Locus range 18012-18835 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)