CRISPRone

CRISPRone report for GCA_900148005.1_60_1

♦ Seq 1: FRVP01000074.1 Pseudomonas aeruginosa isolate 60.1 genome assembly, contig: 60_1.NODE_146_length_37998_cov_63.140587, whole genome shotgun sequence

⇒Summary: seq-len = 38058 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25846-37773 bp Zoom in on locus 1 x27 x24 CRISPR array Location: 25846-27431 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 25846-27431 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 27615-28178 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28182-29210 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29221-30204 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 30191-31492 bp Gene: COG1203:cas3 Type: Type-I Location: 31903-35133 bp Gene: cd09718:cas1 Type: universal Location: 35130-36104 bp CRISPR array Location: 36365-37773 bp Num of repeats: 24 Spacers: s27-s49 CRISPR array Location: 36365-37773 bp Num of repeats: 24 Spacers: s27-s49 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25846-27431 bp]: array | spacers
           [Locus range 36365-37773 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRVP01000062.1 Pseudomonas aeruginosa isolate 60.1 genome assembly, contig: 60_1.NODE_94_length_554227_cov_63.860374, whole genome shotgun sequence

⇒Summary: seq-len = 554287 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111136-111764 bp Zoom in on locus 1 x11 CRISPR array Location: 111136-111764 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 111136-111764 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 111136-111764 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)