CRISPRone

CRISPRone report for GCA_900148025.1_7_2

♦ Seq 1: FRVU01000198.1 Pseudomonas aeruginosa isolate 7-2 genome assembly, contig: 7_2.NODE_214_length_32394_cov_49.973545, whole genome shotgun sequence

⇒Summary: seq-len = 32444 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15860-21307 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 15860-16729 bp Gene: unk Type: unknown Location: 17070-17282 bp Gene: unk Type: unknown Location: 17388-19526 bp Gene: cls000038:cas7 Type: Subtype-I-B Location: 19523-21307 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FRVU01000042.1 Pseudomonas aeruginosa isolate 7-2 genome assembly, contig: 7_2.NODE_45_length_23174_cov_39.064426, whole genome shotgun sequence

⇒Summary: seq-len = 23224 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12901-22959 bp Zoom in on locus 1 x10 x10 CRISPR array Location: 12901-13468 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 12901-13468 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09739:cas6f Type: other Location: 13651-14214 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 14218-15246 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 15257-16240 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 16227-17528 bp Gene: COG1203:cas3 Type: Type-I Location: 17939-21169 bp Gene: cd09718:cas1 Type: universal Location: 21166-22140 bp CRISPR array Location: 22392-22959 bp Num of repeats: 10 Spacers: s10-s18 CRISPR array Location: 22392-22959 bp Num of repeats: 10 Spacers: s10-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12901-13468 bp]: array | spacers
           [Locus range 22392-22959 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FRVU01000451.1 Pseudomonas aeruginosa isolate 7-2 genome assembly, contig: 7_2.NODE_599_length_16920_cov_38.715309, whole genome shotgun sequence

⇒Summary: seq-len = 16970 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 268-837 bp Zoom in on locus 1 x10 CRISPR array Location: 268-837 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 268-837 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 268-837 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)