CRISPRone

CRISPRone report for GCA_900148065.1_B

♦ Seq 1: FRVV01000161.1 Pseudomonas aeruginosa isolate B genome assembly, contig: B.NODE_184_length_52446_cov_58.830132, whole genome shotgun sequence

⇒Summary: seq-len = 52498 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16930-28621 bp Zoom in on locus 1 x26 x21 CRISPR array Location: 16930-18460 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 16930-18460 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 18720-19694 bp Gene: COG1203:cas3 Type: Type-I Location: 19691-22921 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 23332-24633 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 24620-25603 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 25614-26642 bp Gene: cd09739:cas6f Type: other Location: 26646-27209 bp CRISPR array Location: 27393-28621 bp Num of repeats: 21 Spacers: s26-s45 CRISPR array Location: 27393-28621 bp Num of repeats: 21 Spacers: s26-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 16930-18460 bp]: array | spacers
           [Locus range 27393-28621 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)