CRISPRone

CRISPRone report for GCA_900148075.1_C

♦ Seq 1: FRVX01000068.1 Pseudomonas aeruginosa isolate C genome assembly, contig: C.NODE_72_length_64342_cov_58.421730, whole genome shotgun sequence

⇒Summary: seq-len = 64398 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24130-35821 bp Zoom in on locus 1 x21 x26 CRISPR array Location: 24130-25359 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 24130-25359 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 25542-26105 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 26109-27137 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27148-28131 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28118-29419 bp Gene: COG1203:cas3 Type: Type-I Location: 29830-33060 bp Gene: cd09718:cas1 Type: universal Location: 33057-34031 bp CRISPR array Location: 34292-35821 bp Num of repeats: 26 Spacers: s21-s45 CRISPR array Location: 34292-35821 bp Num of repeats: 26 Spacers: s21-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 24130-25359 bp]: array | spacers
           [Locus range 34292-35821 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)