CRISPRone

CRISPRone report for GCA_900148095.1_G

♦ Seq 1: FRVW01000074.1 Pseudomonas aeruginosa genome assembly, contig: G.NODE_79_length_76699_cov_71.477852, whole genome shotgun sequence

⇒Summary: seq-len = 76741 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36487-48178 bp Zoom in on locus 1 x21 x26 CRISPR array Location: 36487-37716 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 36487-37716 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 37899-38462 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38466-39494 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39505-40488 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40475-41776 bp Gene: COG1203:cas3 Type: Type-I Location: 42187-45417 bp Gene: cd09718:cas1 Type: universal Location: 45414-46388 bp CRISPR array Location: 46649-48178 bp Num of repeats: 26 Spacers: s21-s45 CRISPR array Location: 46649-48178 bp Num of repeats: 26 Spacers: s21-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36487-37716 bp]: array | spacers
           [Locus range 46649-48178 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)