CRISPRone

CRISPRone report for GCA_900148105.1_F

♦ Seq 1: FRWB01000025.1 Pseudomonas aeruginosa isolate F genome assembly, contig: F.NODE_27_length_64085_cov_49.288727, whole genome shotgun sequence

⇒Summary: seq-len = 64141 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28578-40269 bp Zoom in on locus 1 x26 x21 CRISPR array Location: 28578-30108 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 28578-30108 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 30368-31342 bp Gene: COG1203:cas3 Type: Type-I Location: 31339-34569 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34980-36281 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36268-37251 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37262-38290 bp Gene: cd09739:cas6f Type: other Location: 38294-38857 bp CRISPR array Location: 39041-40269 bp Num of repeats: 21 Spacers: s26-s45 CRISPR array Location: 39041-40269 bp Num of repeats: 21 Spacers: s26-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28578-30108 bp]: array | spacers
           [Locus range 39041-40269 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)