CRISPRone

CRISPRone report for GCA_900148115.1_E

♦ Seq 1: FRWC01000094.1 Pseudomonas aeruginosa genome assembly, contig: E.NODE_98_length_37242_cov_57.431286, whole genome shotgun sequence

⇒Summary: seq-len = 37294 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13955-25646 bp Zoom in on locus 1 x26 x21 CRISPR array Location: 13955-15485 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 13955-15485 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 15745-16719 bp Gene: COG1203:cas3 Type: Type-I Location: 16716-19946 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 20357-21658 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 21645-22628 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 22639-23667 bp Gene: cd09739:cas6f Type: other Location: 23671-24234 bp CRISPR array Location: 24418-25646 bp Num of repeats: 21 Spacers: s26-s45 CRISPR array Location: 24418-25646 bp Num of repeats: 21 Spacers: s26-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 13955-15485 bp]: array | spacers
           [Locus range 24418-25646 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)