CRISPRone

CRISPRone report for GCA_900148135.1_Ii

♦ Seq 1: FRWD01000043.1 Pseudomonas aeruginosa isolate Ii genome assembly, contig: Ii.NODE_47_length_37642_cov_65.647438, whole genome shotgun sequence

⇒Summary: seq-len = 37694 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12063-23754 bp Zoom in on locus 1 x21 x26 CRISPR array Location: 12063-13292 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 12063-13292 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 13475-14038 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 14042-15070 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 15081-16064 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 16051-17352 bp Gene: COG1203:cas3 Type: Type-I Location: 17763-20993 bp Gene: cd09718:cas1 Type: universal Location: 20990-21964 bp CRISPR array Location: 22225-23754 bp Num of repeats: 26 Spacers: s21-s45 CRISPR array Location: 22225-23754 bp Num of repeats: 26 Spacers: s21-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12063-13292 bp]: array | spacers
           [Locus range 22225-23754 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)