CRISPRone

CRISPRone report for GCA_900148345.1_N

♦ Seq 1: FRWZ01000307.1 Pseudomonas aeruginosa genome assembly, contig: N.NODE_353_length_40613_cov_49.752270, whole genome shotgun sequence

⇒Summary: seq-len = 40667 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12081-23772 bp Zoom in on locus 1 x21 x26 CRISPR array Location: 12081-13310 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 12081-13310 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 13493-14056 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 14060-15088 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 15099-16082 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 16069-17370 bp Gene: COG1203:cas3 Type: Type-I Location: 17781-21011 bp Gene: cd09718:cas1 Type: universal Location: 21008-21982 bp CRISPR array Location: 22243-23772 bp Num of repeats: 26 Spacers: s21-s45 CRISPR array Location: 22243-23772 bp Num of repeats: 26 Spacers: s21-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12081-13310 bp]: array | spacers
           [Locus range 22243-23772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)