CRISPRone

CRISPRone report for GCA_900148395.1_P

♦ Seq 1: FRXD01000006.1 Pseudomonas aeruginosa genome assembly, contig: P.NODE_6_length_64094_cov_55.020172, whole genome shotgun sequence

⇒Summary: seq-len = 64148 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28576-40267 bp Zoom in on locus 1 x26 x21 CRISPR array Location: 28576-30106 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 28576-30106 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 30366-31340 bp Gene: COG1203:cas3 Type: Type-I Location: 31337-34567 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34978-36279 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36266-37249 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37260-38288 bp Gene: cd09739:cas6f Type: other Location: 38292-38855 bp CRISPR array Location: 39039-40267 bp Num of repeats: 21 Spacers: s26-s45 CRISPR array Location: 39039-40267 bp Num of repeats: 21 Spacers: s26-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28576-30106 bp]: array | spacers
           [Locus range 39039-40267 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)