CRISPRone

CRISPRone report for GCA_900148405.1_Q

♦ Seq 1: FRXE01000142.1 Pseudomonas aeruginosa isolate Q genome assembly, contig: Q.NODE_149_length_37352_cov_53.384182, whole genome shotgun sequence

⇒Summary: seq-len = 37406 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 11772-23463 bp Zoom in on locus 1 x21 x26 CRISPR array Location: 11772-13001 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 11772-13001 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 13184-13747 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 13751-14779 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 14790-15773 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 15760-17061 bp Gene: COG1203:cas3 Type: Type-I Location: 17472-20702 bp Gene: cd09718:cas1 Type: universal Location: 20699-21673 bp CRISPR array Location: 21934-23463 bp Num of repeats: 26 Spacers: s21-s45 CRISPR array Location: 21934-23463 bp Num of repeats: 26 Spacers: s21-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 11772-13001 bp]: array | spacers
           [Locus range 21934-23463 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)