CRISPRone

CRISPRone report for GCA_900148415.1_R

♦ Seq 1: FRXF01000331.1 Pseudomonas aeruginosa genome assembly, contig: R.NODE_385_length_37726_cov_52.184834, whole genome shotgun sequence

⇒Summary: seq-len = 37780 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12134-23825 bp Zoom in on locus 1 x21 x26 CRISPR array Location: 12134-13363 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 12134-13363 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 13546-14109 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 14113-15141 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 15152-16135 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 16122-17423 bp Gene: COG1203:cas3 Type: Type-I Location: 17834-21064 bp Gene: cd09718:cas1 Type: universal Location: 21061-22035 bp CRISPR array Location: 22296-23825 bp Num of repeats: 26 Spacers: s21-s45 CRISPR array Location: 22296-23825 bp Num of repeats: 26 Spacers: s21-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12134-13363 bp]: array | spacers
           [Locus range 22296-23825 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)