CRISPRone

CRISPRone report for GCA_900148425.1_S

♦ Seq 1: FRXH01000143.1 Pseudomonas aeruginosa genome assembly, contig: NODE_152_length_64357_cov_62.141010, whole genome shotgun sequence

⇒Summary: seq-len = 64411 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24145-35836 bp Zoom in on locus 1 x21 x26 CRISPR array Location: 24145-25374 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 24145-25374 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 25557-26120 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 26124-27152 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27163-28146 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28133-29434 bp Gene: COG1203:cas3 Type: Type-I Location: 29845-33075 bp Gene: cd09718:cas1 Type: universal Location: 33072-34046 bp CRISPR array Location: 34307-35836 bp Num of repeats: 26 Spacers: s21-s45 CRISPR array Location: 34307-35836 bp Num of repeats: 26 Spacers: s21-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 24145-25374 bp]: array | spacers
           [Locus range 34307-35836 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)