CRISPRone

CRISPRone report for GCA_900148455.1_V

♦ Seq 1: FRXK01000025.1 Pseudomonas aeruginosa isolate V genome assembly, contig: NODE_28_length_64101_cov_61.853558, whole genome shotgun sequence

⇒Summary: seq-len = 64151 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28572-40263 bp Zoom in on locus 1 x26 x21 CRISPR array Location: 28572-30102 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 28572-30102 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 30362-31336 bp Gene: COG1203:cas3 Type: Type-I Location: 31333-34563 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34974-36275 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36262-37245 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37256-38284 bp Gene: cd09739:cas6f Type: other Location: 38288-38851 bp CRISPR array Location: 39035-40263 bp Num of repeats: 21 Spacers: s26-s45 CRISPR array Location: 39035-40263 bp Num of repeats: 21 Spacers: s26-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28572-30102 bp]: array | spacers
           [Locus range 39035-40263 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)