CRISPRone

CRISPRone report for GCA_900148465.1_X

♦ Seq 1: FRXJ01000071.1 Pseudomonas aeruginosa isolate X genome assembly, contig: X.NODE_74_length_65506_cov_69.984428, whole genome shotgun sequence

⇒Summary: seq-len = 65550 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25294-36985 bp Zoom in on locus 1 x21 x26 CRISPR array Location: 25294-26523 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 25294-26523 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 26706-27269 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27273-28301 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28312-29295 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 29282-30583 bp Gene: COG1203:cas3 Type: Type-I Location: 30994-34224 bp Gene: cd09718:cas1 Type: universal Location: 34221-35195 bp CRISPR array Location: 35456-36985 bp Num of repeats: 26 Spacers: s21-s45 CRISPR array Location: 35456-36985 bp Num of repeats: 26 Spacers: s21-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25294-26523 bp]: array | spacers
           [Locus range 35456-36985 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)