CRISPRone

CRISPRone report for GCA_900149285.1_PcyII-10

♦ Seq 1: LT673656.1 Pseudomonas aeruginosa isolate PcyII-10 genome assembly, chromosome: PcyII-10

⇒Summary: seq-len = 6288645 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1488702-1490110 bp 2 Locus 2: 2784771-2795509 bp Zoom in on locus 1 x24 Zoom in on locus 2 x16 x21 CRISPR array Location: 1488702-1490110 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 1488702-1490110 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 2784771-2785699 bp Num of repeats: 16 Spacers: s24-s38 CRISPR array Location: 2784771-2785699 bp Num of repeats: 16 Spacers: s24-s38 Gene: cd09739:cas6f Type: other Location: 2785882-2786445 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2786449-2787477 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2787488-2788471 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2788458-2789762 bp Gene: COG1203:cas3 Type: Type-I Location: 2789820-2793050 bp Gene: cd09718:cas1 Type: universal Location: 2793047-2794021 bp CRISPR array Location: 2794282-2795509 bp Num of repeats: 21 Spacers: s39-s58 CRISPR array Location: 2794282-2795509 bp Num of repeats: 21 Spacers: s39-s58 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1488702-1490110 bp]: array | spacers
           [Locus range 2784771-2785699 bp]: array | spacers
           [Locus range 2794282-2795509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)