CRISPRone
CRISPRone report for GCA_900164305.1_16780_8_6
♦ Seq 1: FUMS01000004.1 Clostridioides difficile strain VRECD0120 genome assembly, contig: ERS716993SCcontig000004, whole genome shotgun sequence
⇒Summary: seq-len = 526333 bp; # of CRISPR array = 1; # of cas gene = 9 (type I) 
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 275735-278264 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: FUMS01000001.1 Clostridioides difficile strain VRECD0120 genome assembly, contig: ERS716993SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 1154611 bp; # of CRISPR array = 3; # of cas gene = 6 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 249296-249792 bp]: array | spacers
[Locus range 495843-496265 bp]: array | spacers
[Locus range 855230-855388 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: FUMS01000002.1 Clostridioides difficile strain VRECD0120 genome assembly, contig: ERS716993SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 660855 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 190350-191633 bp]: array | spacers
[Locus range 449162-449389 bp]: array | spacers
[Locus range 559679-559974 bp]: array | spacers
[Locus range 652599-652827 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: FUMS01000006.1 Clostridioides difficile strain VRECD0120 genome assembly, contig: ERS716993SCcontig000006, whole genome shotgun sequence
⇒Summary: seq-len = 194710 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 130014-131101 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 249296-249792 bp]: array | spacers
[Locus range 495843-496265 bp]: array | spacers
[Locus range 855230-855388 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: FUMS01000002.1 Clostridioides difficile strain VRECD0120 genome assembly, contig: ERS716993SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 660855 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 190350-191633 bp]: array | spacers
[Locus range 449162-449389 bp]: array | spacers
[Locus range 559679-559974 bp]: array | spacers
[Locus range 652599-652827 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: FUMS01000006.1 Clostridioides difficile strain VRECD0120 genome assembly, contig: ERS716993SCcontig000006, whole genome shotgun sequence
⇒Summary: seq-len = 194710 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 130014-131101 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 130014-131101 bp]: array | spacers