CRISPRone

CRISPRone report for GCA_900164505.1_16780_8_68

♦ Seq 1: FUMZ01000013.1 Clostridioides difficile strain VRECD0082 genome assembly, contig: ERS717055SCcontig000013, whole genome shotgun sequence

⇒Summary: seq-len = 126639 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 99690-100575 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUMZ01000002.1 Clostridioides difficile strain VRECD0082 genome assembly, contig: ERS717055SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 543660 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 242012-243951 bp]: array | spacers
           [Locus range 289858-290213 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUMZ01000025.1 Clostridioides difficile strain VRECD0082 genome assembly, contig: ERS717055SCcontig000025, whole genome shotgun sequence

⇒Summary: seq-len = 33237 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22814-22909 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUMZ01000006.1 Clostridioides difficile strain VRECD0082 genome assembly, contig: ERS717055SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 215939 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUMZ01000022.1 Clostridioides difficile strain VRECD0082 genome assembly, contig: ERS717055SCcontig000022, whole genome shotgun sequence

⇒Summary: seq-len = 42596 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24370-24860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUMZ01000001.1 Clostridioides difficile strain VRECD0082 genome assembly, contig: ERS717055SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 679792 bp; # of CRISPR array = 2; # of cas gene = 11  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 150799-151224 bp]: array | spacers
           [Locus range 675519-675614 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUMZ01000004.1 Clostridioides difficile strain VRECD0082 genome assembly, contig: ERS717055SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 271563 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 179626-179853 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUMZ01000007.1 Clostridioides difficile strain VRECD0082 genome assembly, contig: ERS717055SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 204299 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53121-53940 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: FUMZ01000015.1 Clostridioides difficile strain VRECD0082 genome assembly, contig: ERS717055SCcontig000015, whole genome shotgun sequence

⇒Summary: seq-len = 92874 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 30938-32017 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)