CRISPRone

CRISPRone report for GCA_900164535.1_16780_8_79

♦ Seq 1: FUNC01000004.1 Clostridioides difficile strain VRECD0171 genome assembly, contig: ERS717066SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 326156 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 268043-268200 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUNC01000001.1 Clostridioides difficile strain VRECD0171 genome assembly, contig: ERS717066SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 402887 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4198-4693 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUNC01000002.1 Clostridioides difficile strain VRECD0171 genome assembly, contig: ERS717066SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 397311 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185312-185539 bp]: array | spacers
           [Locus range 296035-296330 bp]: array | spacers
           [Locus range 389057-389285 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUNC01000007.1 Clostridioides difficile strain VRECD0171 genome assembly, contig: ERS717066SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 263908 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 51089-52371 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUNC01000005.1 Clostridioides difficile strain VRECD0171 genome assembly, contig: ERS717066SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 315365 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 248136-250664 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUNC01000012.1 Clostridioides difficile strain VRECD0171 genome assembly, contig: ERS717066SCcontig000012, whole genome shotgun sequence

⇒Summary: seq-len = 190267 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59393-60479 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUNC01000003.1 Clostridioides difficile strain VRECD0171 genome assembly, contig: ERS717066SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 337863 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 241960-242382 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)