CRISPRone

CRISPRone report for GCA_900164575.1_16852_2_2

♦ Seq 1: FUNG01000004.1 Clostridioides difficile strain VRECD0009 genome assembly, contig: ERS716895SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 433470 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 248846-249799 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUNG01000001.1 Clostridioides difficile strain VRECD0009 genome assembly, contig: ERS716895SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 1092033 bp; # of CRISPR array = 4; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 257635-258123 bp]: array | spacers
           [Locus range 303796-305469 bp]: array | spacers
           [Locus range 606785-607276 bp]: array | spacers
           [Locus range 850824-851516 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUNG01000019.1 Clostridioides difficile strain VRECD0009 genome assembly, contig: ERS716895SCcontig000019, whole genome shotgun sequence

⇒Summary: seq-len = 14350 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8826-9186 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUNG01000008.1 Clostridioides difficile strain VRECD0009 genome assembly, contig: ERS716895SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 179433 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60862-61810 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUNG01000009.1 Clostridioides difficile strain VRECD0009 genome assembly, contig: ERS716895SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 149418 bp; # of CRISPR array = 1; # of cas gene = 3  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19012-19957 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUNG01000021.1 Clostridioides difficile strain VRECD0009 genome assembly, contig: ERS716895SCcontig000021, whole genome shotgun sequence

⇒Summary: seq-len = 12613 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4755-5442 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUNG01000006.1 Clostridioides difficile strain VRECD0009 genome assembly, contig: ERS716895SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 214204 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 157215-158095 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUNG01000003.1 Clostridioides difficile strain VRECD0009 genome assembly, contig: ERS716895SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 473305 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91050-91406 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)