CRISPRone

CRISPRone report for GCA_900164685.1_16852_2_19

♦ Seq 1: FUNR01000002.1 Clostridioides difficile strain VRECD0006 genome assembly, contig: ERS716912SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 918048 bp; # of CRISPR array = 6; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60644-62384 bp]: array | spacers
           [Locus range 360525-361342 bp]: array | spacers
           [Locus range 361945-362499 bp]: array | spacers
           [Locus range 452023-452781 bp]: array | spacers
           [Locus range 569131-569552 bp]: array | spacers
           [Locus range 773087-773513 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUNR01000001.1 Clostridioides difficile strain VRECD0006 genome assembly, contig: ERS716912SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 972531 bp; # of CRISPR array = 3; # of cas gene = 6 (type I, III)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 240420-240977 bp]: array | spacers
           [Locus range 488961-489188 bp]: array | spacers
           [Locus range 830791-831017 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUNR01000004.1 Clostridioides difficile strain VRECD0006 genome assembly, contig: ERS716912SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 519377 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 20173-20267 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)