CRISPRone

CRISPRone report for GCA_900164885.1_16852_2_71

♦ Seq 1: FUOM01000007.1 Clostridioides difficile strain VRECD0080 genome assembly, contig: ERS716964SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 255428 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8633-9257 bp]: array | spacers
           [Locus range 10981-11076 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUOM01000003.1 Clostridioides difficile strain VRECD0080 genome assembly, contig: ERS716964SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 353581 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90914-91538 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUOM01000001.1 Clostridioides difficile strain VRECD0080 genome assembly, contig: ERS716964SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 842211 bp; # of CRISPR array = 3; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 235688-235782 bp]: array | spacers
           [Locus range 480655-481141 bp]: array | spacers
           [Locus range 829810-830235 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUOM01000004.1 Clostridioides difficile strain VRECD0080 genome assembly, contig: ERS716964SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 277268 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 258849-259403 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUOM01000002.1 Clostridioides difficile strain VRECD0080 genome assembly, contig: ERS716964SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 591458 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 57069-58728 bp]: array | spacers
           [Locus range 282107-282200 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUOM01000005.1 Clostridioides difficile strain VRECD0080 genome assembly, contig: ERS716964SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 262725 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 86354-86714 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUOM01000009.1 Clostridioides difficile strain VRECD0080 genome assembly, contig: ERS716964SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 178048 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 173634-174057 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUOM01000023.1 Clostridioides difficile strain VRECD0080 genome assembly, contig: ERS716964SCcontig000023, whole genome shotgun sequence

⇒Summary: seq-len = 9895 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4991-5215 bp]: array | spacers
           [Locus range 8678-9497 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)