CRISPRone

CRISPRone report for GCA_900165275.1_16780_8_73

♦ Seq 1: FUPY01000006.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 213971 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUPY01000016.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000016, whole genome shotgun sequence

⇒Summary: seq-len = 124440 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 98151-98576 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUPY01000011.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000011, whole genome shotgun sequence

⇒Summary: seq-len = 167119 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 107871-109477 bp]: array | spacers
           [Locus range 156191-156420 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUPY01000023.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000023, whole genome shotgun sequence

⇒Summary: seq-len = 71477 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45150-45772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUPY01000042.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000042, whole genome shotgun sequence

⇒Summary: seq-len = 14684 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9089-9316 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUPY01000008.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 184135 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53265-54676 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUPY01000005.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 214766 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4185-4279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUPY01000017.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000017, whole genome shotgun sequence

⇒Summary: seq-len = 118298 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 72193-73807 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: FUPY01000043.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000043, whole genome shotgun sequence

⇒Summary: seq-len = 13923 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7480-7643 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: FUPY01000009.1 Clostridioides difficile strain VRECD0116 genome assembly, contig: ERS717060SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 179341 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59535-59958 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)