CRISPRone

CRISPRone report for GCA_900165295.1_16780_8_78

♦ Seq 1: FUQD01000003.1 Clostridioides difficile strain VRECD0158 genome assembly, contig: ERS717065SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 299244 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 170096-170713 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUQD01000004.1 Clostridioides difficile strain VRECD0158 genome assembly, contig: ERS717065SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 296983 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 249397-249557 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUQD01000002.1 Clostridioides difficile strain VRECD0158 genome assembly, contig: ERS717065SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 316057 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 38053-39326 bp]: array | spacers
           [Locus range 271104-271197 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUQD01000001.1 Clostridioides difficile strain VRECD0158 genome assembly, contig: ERS717065SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 525531 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 78203-78959 bp]: array | spacers
           [Locus range 189281-189839 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUQD01000020.1 Clostridioides difficile strain VRECD0158 genome assembly, contig: ERS717065SCcontig000020, whole genome shotgun sequence

⇒Summary: seq-len = 65081 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60138-61221 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUQD01000006.1 Clostridioides difficile strain VRECD0158 genome assembly, contig: ERS717065SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 249486 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 244918-245276 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUQD01000011.1 Clostridioides difficile strain VRECD0158 genome assembly, contig: ERS717065SCcontig000011, whole genome shotgun sequence

⇒Summary: seq-len = 148542 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10338-10697 bp]: array | spacers
           [Locus range 12301-12459 bp]: array | spacers
           [Locus range 14252-14874 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)