CRISPRone

CRISPRone report for GCA_900165425.1_16780_8_88

♦ Seq 1: FUQJ01000002.1 Clostridioides difficile strain VRECD0187 genome assembly, contig: ERS717075SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 476507 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 172233-173851 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUQJ01000008.1 Clostridioides difficile strain VRECD0187 genome assembly, contig: ERS717075SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 212212 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 92276-93493 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUQJ01000001.1 Clostridioides difficile strain VRECD0187 genome assembly, contig: ERS717075SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 494986 bp; # of CRISPR array = 2; # of cas gene = 14  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 247967-250558 bp]: array | spacers
           [Locus range 459440-460255 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUQJ01000006.1 Clostridioides difficile strain VRECD0187 genome assembly, contig: ERS717075SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 292104 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 265816-265976 bp]: array | spacers
           [Locus range 266286-266704 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUQJ01000005.1 Clostridioides difficile strain VRECD0187 genome assembly, contig: ERS717075SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 314642 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 123789-125010 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUQJ01000022.1 Clostridioides difficile strain VRECD0187 genome assembly, contig: ERS717075SCcontig000022, whole genome shotgun sequence

⇒Summary: seq-len = 43932 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 29829-30054 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUQJ01000004.1 Clostridioides difficile strain VRECD0187 genome assembly, contig: ERS717075SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 320248 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 244917-245674 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUQJ01000015.1 Clostridioides difficile strain VRECD0187 genome assembly, contig: ERS717075SCcontig000015, whole genome shotgun sequence

⇒Summary: seq-len = 93511 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53101-55313 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: FUQJ01000017.1 Clostridioides difficile strain VRECD0187 genome assembly, contig: ERS717075SCcontig000017, whole genome shotgun sequence

⇒Summary: seq-len = 77126 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 57619-58046 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)