CRISPRone

CRISPRone report for GCA_900165975.1_11670_1_4

♦ Seq 1: FUSQ01000018.1 Clostridioides difficile strain CD04 genome assembly, contig: ERS368449SCcontig000018, whole genome shotgun sequence

⇒Summary: seq-len = 94986 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUSQ01000003.1 Clostridioides difficile strain CD04 genome assembly, contig: ERS368449SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 316133 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 233522-233749 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUSQ01000001.1 Clostridioides difficile strain CD04 genome assembly, contig: ERS368449SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 343151 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 97272-97629 bp]: array | spacers
           [Locus range 205473-205567 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUSQ01000014.1 Clostridioides difficile strain CD04 genome assembly, contig: ERS368449SCcontig000014, whole genome shotgun sequence

⇒Summary: seq-len = 140102 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61748-62959 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUSQ01000004.1 Clostridioides difficile strain CD04 genome assembly, contig: ERS368449SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 235262 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUSQ01000033.1 Clostridioides difficile strain CD04 genome assembly, contig: ERS368449SCcontig000033, whole genome shotgun sequence

⇒Summary: seq-len = 23618 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190-284 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUSQ01000006.1 Clostridioides difficile strain CD04 genome assembly, contig: ERS368449SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 201099 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 124927-127783 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUSQ01000013.1 Clostridioides difficile strain CD04 genome assembly, contig: ERS368449SCcontig000013, whole genome shotgun sequence

⇒Summary: seq-len = 140782 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 135357-135715 bp]: array | spacers
           [Locus range 135776-135937 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: FUSQ01000035.1 Clostridioides difficile strain CD04 genome assembly, contig: ERS368449SCcontig000035, whole genome shotgun sequence

⇒Summary: seq-len = 13233 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4432-5388 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)