CRISPRone

CRISPRone report for GCA_900166145.1_11670_1_34

♦ Seq 1: FUTH01000001.1 Clostridioides difficile strain CD32 genome assembly, contig: ERS368477SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 533180 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 254989-256588 bp]: array | spacers
           [Locus range 488346-488439 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUTH01000010.1 Clostridioides difficile strain CD32 genome assembly, contig: ERS368477SCcontig000010, whole genome shotgun sequence

⇒Summary: seq-len = 190705 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 171594-172350 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUTH01000007.1 Clostridioides difficile strain CD32 genome assembly, contig: ERS368477SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 245818 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124574-125133 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUTH01000017.1 Clostridioides difficile strain CD32 genome assembly, contig: ERS368477SCcontig000017, whole genome shotgun sequence

⇒Summary: seq-len = 68161 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3473-4557 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUTH01000004.1 Clostridioides difficile strain CD32 genome assembly, contig: ERS368477SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 323419 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 230468-230962 bp]: array | spacers
           [Locus range 232825-233050 bp]: array | spacers
           [Locus range 234734-235025 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUTH01000003.1 Clostridioides difficile strain CD32 genome assembly, contig: ERS368477SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 370488 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 80528-81144 bp]: array | spacers
           [Locus range 326020-326377 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUTH01000020.1 Clostridioides difficile strain CD32 genome assembly, contig: ERS368477SCcontig000020, whole genome shotgun sequence

⇒Summary: seq-len = 14217 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8801-9554 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUTH01000002.1 Clostridioides difficile strain CD32 genome assembly, contig: ERS368477SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 463076 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 162811-162971 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)