CRISPRone

CRISPRone report for GCA_900166355.1_11670_1_15

♦ Seq 1: FUUC01000002.1 Clostridioides difficile strain CD14 genome assembly, contig: ERS368459SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 456502 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 200760-203616 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUUC01000008.1 Clostridioides difficile strain CD14 genome assembly, contig: ERS368459SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 181157 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 116165-117504 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUUC01000006.1 Clostridioides difficile strain CD14 genome assembly, contig: ERS368459SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 210060 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90921-91677 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUUC01000019.1 Clostridioides difficile strain CD14 genome assembly, contig: ERS368459SCcontig000019, whole genome shotgun sequence

⇒Summary: seq-len = 37037 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23031-23321 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUUC01000001.1 Clostridioides difficile strain CD14 genome assembly, contig: ERS368459SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 1249911 bp; # of CRISPR array = 3; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 400037-400263 bp]: array | spacers
           [Locus range 646965-647713 bp]: array | spacers
           [Locus range 1020533-1020824 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUUC01000027.1 Clostridioides difficile strain CD14 genome assembly, contig: ERS368459SCcontig000027, whole genome shotgun sequence

⇒Summary: seq-len = 14856 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9555-9977 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUUC01000016.1 Clostridioides difficile strain CD14 genome assembly, contig: ERS368459SCcontig000016, whole genome shotgun sequence

⇒Summary: seq-len = 77610 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 57662-59405 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUUC01000022.1 Clostridioides difficile strain CD14 genome assembly, contig: ERS368459SCcontig000022, whole genome shotgun sequence

⇒Summary: seq-len = 26353 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12539-13429 bp]: array | spacers
           [Locus range 15044-15270 bp]: array | spacers
           [Locus range 15414-15509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)