CRISPRone

CRISPRone report for GCA_900166465.1_11670_1_14

♦ Seq 1: FUUJ01000012.1 Clostridioides difficile strain CD13 genome assembly, contig: ERS368458SCcontig000012, whole genome shotgun sequence

⇒Summary: seq-len = 140445 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 131149-131503 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUUJ01000003.1 Clostridioides difficile strain CD13 genome assembly, contig: ERS368458SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 371136 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44385-44743 bp]: array | spacers
           [Locus range 289617-290103 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUUJ01000007.1 Clostridioides difficile strain CD13 genome assembly, contig: ERS368458SCcontig000007, whole genome shotgun sequence

⇒Summary: seq-len = 215879 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90790-91348 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUUJ01000005.1 Clostridioides difficile strain CD13 genome assembly, contig: ERS368458SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 246787 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17702-18459 bp]: array | spacers
           [Locus range 109187-109611 bp]: array | spacers
           [Locus range 111215-111439 bp]: array | spacers
           [Locus range 113232-113985 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUUJ01000017.1 Clostridioides difficile strain CD13 genome assembly, contig: ERS368458SCcontig000017, whole genome shotgun sequence

⇒Summary: seq-len = 89547 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3114-3275 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUUJ01000019.1 Clostridioides difficile strain CD13 genome assembly, contig: ERS368458SCcontig000019, whole genome shotgun sequence

⇒Summary: seq-len = 68594 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3842-4992 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUUJ01000025.1 Clostridioides difficile strain CD13 genome assembly, contig: ERS368458SCcontig000025, whole genome shotgun sequence

⇒Summary: seq-len = 14438 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4492-5641 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUUJ01000001.1 Clostridioides difficile strain CD13 genome assembly, contig: ERS368458SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 530770 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44583-44677 bp]: array | spacers
           [Locus range 276418-278018 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)