CRISPRone

CRISPRone report for GCA_900166505.1_11670_1_9

♦ Seq 1: FUUQ01000003.1 Clostridioides difficile strain CD08 genome assembly, contig: ERS368453SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 292829 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 2563-3179 bp]: array | spacers
           [Locus range 248088-248445 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUUQ01000018.1 Clostridioides difficile strain CD08 genome assembly, contig: ERS368453SCcontig000018, whole genome shotgun sequence

⇒Summary: seq-len = 81748 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17873-18364 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: FUUQ01000020.1 Clostridioides difficile strain CD08 genome assembly, contig: ERS368453SCcontig000020, whole genome shotgun sequence

⇒Summary: seq-len = 68248 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3473-4623 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: FUUQ01000028.1 Clostridioides difficile strain CD08 genome assembly, contig: ERS368453SCcontig000028, whole genome shotgun sequence

⇒Summary: seq-len = 14616 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4666-5815 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: FUUQ01000009.1 Clostridioides difficile strain CD08 genome assembly, contig: ERS368453SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 159416 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21980-22139 bp]: array | spacers
           [Locus range 23804-24028 bp]: array | spacers
           [Locus range 25821-26707 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: FUUQ01000001.1 Clostridioides difficile strain CD08 genome assembly, contig: ERS368453SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 577457 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 21095-21189 bp]: array | spacers
           [Locus range 252958-254558 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: FUUQ01000026.1 Clostridioides difficile strain CD08 genome assembly, contig: ERS368453SCcontig000026, whole genome shotgun sequence

⇒Summary: seq-len = 16787 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16186-16610 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: FUUQ01000006.1 Clostridioides difficile strain CD08 genome assembly, contig: ERS368453SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 203747 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 110261-110421 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: FUUQ01000005.1 Clostridioides difficile strain CD08 genome assembly, contig: ERS368453SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 216559 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91494-91986 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)