CRISPRone

CRISPRone report for GCA_900167195.1_IMG-taxon_2568526011_annotated_assembly

♦ Seq 1: FUXR01000060.1 Pseudomonas aeruginosa DSM 50071 genome assembly, contig: BO75DRAFT_scaffold00060.60, whole genome shotgun sequence

⇒Summary: seq-len = 9487 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8-9485 bp Zoom in on locus 1 x4 x12 CRISPR array Location: 8-215 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 8-215 bp Num of repeats: 4 Spacers: s1-s3 Gene: cd09739:cas6f Type: other Location: 397-960 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 964-1992 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2003-2986 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2973-4277 bp Gene: COG1203:cas3 Type: Type-I Location: 4335-7565 bp Gene: cd09718:cas1 Type: universal Location: 7562-8536 bp CRISPR array Location: 8798-9485 bp Num of repeats: 12 Spacers: s4-s14 CRISPR array Location: 8798-9485 bp Num of repeats: 12 Spacers: s4-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8-215 bp]: array | spacers
           [Locus range 8798-9485 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: FUXR01000043.1 Pseudomonas aeruginosa DSM 50071 genome assembly, contig: BO75DRAFT_scaffold00043.43, whole genome shotgun sequence

⇒Summary: seq-len = 38773 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38560-38769 bp Zoom in on locus 1 x4 CRISPR array Location: 38560-38769 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 38560-38769 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 38560-38769 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)