CRISPRone

CRISPRone report for GCA_900185255.1_NN2

♦ Seq 1: LT883143.1 Pseudomonas aeruginosa C-NN2 isolate early isolate NN2 (clone C) genome assembly, chromosome: I

⇒Summary: seq-len = 6902967 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1598518-1599267 bp 2 Locus 2: 3055329-3065927 bp Zoom in on locus 1 x13 Zoom in on locus 2 x19 x10 CRISPR array Location: 1598518-1599267 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 1598518-1599267 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 3055329-3056436 bp Num of repeats: 19 Spacers: s13-s30 CRISPR array Location: 3055329-3056436 bp Num of repeats: 19 Spacers: s13-s30 Gene: cd09739:cas6f Type: other Location: 3056619-3057182 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3057186-3058214 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3058225-3059208 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3059195-3060496 bp Gene: COG1203:cas3 Type: Type-I Location: 3060907-3064137 bp Gene: cd09718:cas1 Type: universal Location: 3064134-3065108 bp CRISPR array Location: 3065360-3065927 bp Num of repeats: 10 Spacers: s31-s39 CRISPR array Location: 3065360-3065927 bp Num of repeats: 10 Spacers: s31-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1598518-1599267 bp]: array | spacers
           [Locus range 3055329-3056436 bp]: array | spacers
           [Locus range 3065360-3065927 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)