CRISPRone

CRISPRone report for GCA_900243185.1_R_10870

♦ Seq 1: OEZR01000022.1 Clostridioides difficile strain R 10870 genome assembly, contig: R_10870_contig22, whole genome shotgun sequence

⇒Summary: seq-len = 334491 bp; # of CRISPR array = 3; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 12336-12565 bp]: array | spacers
           [Locus range 54293-54721 bp]: array | spacers
           [Locus range 165170-166319 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: OEZR01000012.1 Clostridioides difficile strain R 10870 genome assembly, contig: R_10870_contig12, whole genome shotgun sequence

⇒Summary: seq-len = 107442 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35948-36042 bp]: array | spacers
           [Locus range 37797-38153 bp]: array | spacers
           [Locus range 74711-74985 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: OEZR01000054.1 Clostridioides difficile strain R 10870 genome assembly, contig: R_10870_contig54, whole genome shotgun sequence

⇒Summary: seq-len = 228363 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 46040-46135 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: OEZR01000085.1 Clostridioides difficile strain R 10870 genome assembly, contig: R_10870_contig85, whole genome shotgun sequence

⇒Summary: seq-len = 222760 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 129041-129202 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: OEZR01000045.1 Clostridioides difficile strain R 10870 genome assembly, contig: R_10870_contig45, whole genome shotgun sequence

⇒Summary: seq-len = 65933 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47283-47710 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: OEZR01000068.1 Clostridioides difficile strain R 10870 genome assembly, contig: R_10870_contig68, whole genome shotgun sequence

⇒Summary: seq-len = 71898 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24170-24265 bp]: array | spacers
           [Locus range 24365-24832 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: OEZR01000076.1 Clostridioides difficile strain R 10870 genome assembly, contig: R_10870_contig76, whole genome shotgun sequence

⇒Summary: seq-len = 58406 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3850-4539 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: OEZR01000047.1 Clostridioides difficile strain R 10870 genome assembly, contig: R_10870_contig47, whole genome shotgun sequence

⇒Summary: seq-len = 125149 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 96388-98334 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)