CRISPRone

CRISPRone report for GCA_900243345.1_R_9385

♦ Seq 1: OFAA01000010.1 Clostridioides difficile strain R 9385 genome assembly, contig: R_9385_contig10, whole genome shotgun sequence

⇒Summary: seq-len = 133132 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 5337-6025 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: OFAA01000048.1 Clostridioides difficile strain R 9385 genome assembly, contig: R_9385_contig48, whole genome shotgun sequence

⇒Summary: seq-len = 81628 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18025-18318 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: OFAA01000073.1 Clostridioides difficile strain R 9385 genome assembly, contig: R_9385_contig73, whole genome shotgun sequence

⇒Summary: seq-len = 39714 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31496-33099 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: OFAA01000066.1 Clostridioides difficile strain R 9385 genome assembly, contig: R_9385_contig66, whole genome shotgun sequence

⇒Summary: seq-len = 83060 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 61116-61667 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: OFAA01000092.1 Clostridioides difficile strain R 9385 genome assembly, contig: R_9385_contig92, whole genome shotgun sequence

⇒Summary: seq-len = 91290 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20977-21527 bp]: array | spacers
           [Locus range 23210-23642 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: OFAA01000078.1 Clostridioides difficile strain R 9385 genome assembly, contig: R_9385_contig78, whole genome shotgun sequence

⇒Summary: seq-len = 74107 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24369-25057 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: OFAA01000020.1 Clostridioides difficile strain R 9385 genome assembly, contig: R_9385_contig20, whole genome shotgun sequence

⇒Summary: seq-len = 161901 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 95460-97203 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: OFAA01000084.1 Clostridioides difficile strain R 9385 genome assembly, contig: R_9385_contig84, whole genome shotgun sequence

⇒Summary: seq-len = 147356 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 116245-117199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)