CRISPRone

CRISPRone report for GCA_900445515.1_53750_A01

♦ Seq 1: UFTH01000001.1 Bacteroides fragilis strain NCTC9343 genome assembly, contig: ERS1554590SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 5018953 bp; # of CRISPR array = 2; # of cas gene = 9  (type I, II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 727727-731340 bp 2 Locus 2: 1402763-1411635 bp 3 Locus 3: 4944732-4947048 bp Zoom in on locus 1 Zoom in on locus 2 x27 Zoom in on locus 3 x9 Gene: cd09692:cas5 Type: Subtype-I-B Location: 727727-728395 bp Gene: unk Type: unknown Location: 728398-729171 bp Gene: unk Type: unknown Location: 729179-730444 bp Gene: pfam13280:WYL Type: other Location: 730441-731340 bp CRISPR array Location: 1402763-1404800 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 1402763-1404800 bp Num of repeats: 27 Spacers: s1-s26 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 1404909-1405241 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 1405245-1406177 bp Gene: unk Type: unknown Location: 1406297-1406605 bp Gene: unk Type: unknown Location: 1406672-1407196 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 1407212-1411522 bp antiRepeat Location: 1411590-1411635 bp Strand: - Match length: 26 bp Mismatch: 21 bp CRISPR array Location: 4944732-4945274 bp Num of repeats: 9 Spacers: s27-s34 CRISPR array Location: 4944732-4945274 bp Num of repeats: 9 Spacers: s27-s34 Gene: cd09725:cas2 Type: universal Location: 4945487-4945750 bp Gene: cd09722:cas1 Type: universal Location: 4945753-4945992 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 4945985-4946365 bp Gene: cd09652:cas6 Type: other Location: 4946377-4947048 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1402763-1404800 bp]: array | spacers
           [Locus range 4944732-4945274 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)