CRISPRone

CRISPRone report for GCA_900455115.1_43295_E02

♦ Seq 1: UGUE01000006.1 Pseudomonas aeruginosa strain NCTC11448 genome assembly, contig: ERS1018585SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 1562734 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 998804-999072 bp Zoom in on locus 1 x5 CRISPR array Location: 998804-999072 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 998804-999072 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 998804-999072 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: UGUE01000001.1 Pseudomonas aeruginosa strain NCTC11448 genome assembly, contig: ERS1018585SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 933163 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 744263-754031 bp Zoom in on locus 1 x12 x9 CRISPR array Location: 744263-744950 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 744263-744950 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 745133-745696 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 745700-746728 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 746739-747722 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 747709-749013 bp Gene: COG1203:cas3 Type: Type-I Location: 749071-752301 bp Gene: cd09718:cas1 Type: universal Location: 752298-753272 bp CRISPR array Location: 753524-754031 bp Num of repeats: 9 Spacers: s12-s19 CRISPR array Location: 753524-754031 bp Num of repeats: 9 Spacers: s12-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 744263-744950 bp]: array | spacers
           [Locus range 753524-754031 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)