CRISPRone

CRISPRone report for GCA_900455205.1_43222_H01

♦ Seq 1: UGUG01000006.1 Pseudomonas aeruginosa strain NCTC11449 genome assembly, contig: ERS1018586SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 4197032 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 259326-269769 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 259326-260433 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 259326-260433 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 260693-261667 bp Gene: COG1203:cas3 Type: Type-I Location: 261664-264894 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 264952-266256 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 266243-267226 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 267237-268265 bp Gene: cd09739:cas6f Type: other Location: 268269-268832 bp CRISPR array Location: 269082-269769 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 269082-269769 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 259326-260433 bp]: array | spacers
           [Locus range 269082-269769 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)