CRISPRone

CRISPRone report for GCA_900455215.1_43222_F01

♦ Seq 1: UATZ01000003.1 Pseudomonas aeruginosa strain NCTC11444 genome assembly, contig: ERS1018583SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 390649 bp; # of CRISPR array = 2; # of cas gene = 4  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 386998-390647 bp Zoom in on locus 1 x3 x11 CRISPR array Location: 386998-387162 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 386998-387162 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 387262-387963 bp Num of repeats: 11 Spacers: s3-s12 CRISPR array Location: 387262-387963 bp Num of repeats: 11 Spacers: s3-s12 Gene: cd09725:cas2 Type: universal Location: 388143-388433 bp Gene: cd09721:cas1 Type: universal Location: 388443-389483 bp Gene: pfam01930:cas4 Type: Type-I Location: 389487-390119 bp Gene: pfam05107:cas7b Type: Type-I Location: 390138-390647 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 386998-387162 bp]: array | spacers
           [Locus range 387262-387963 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: UATZ01000005.1 Pseudomonas aeruginosa strain NCTC11444 genome assembly, contig: ERS1018583SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 831725 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 559696-568450 bp Zoom in on locus 1 x15 CRISPR array Location: 559696-560661 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 559696-560661 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09725:cas2 Type: universal Location: 560841-561131 bp Gene: cd09721:cas1 Type: universal Location: 561141-562181 bp Gene: pfam01930:cas4 Type: Type-I Location: 562185-562817 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 562836-563705 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 563702-565495 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 565492-566166 bp Gene: cd09641:cas3HD Type: Type-I Location: 566216-568450 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 559696-560661 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)