CRISPRone

CRISPRone report for GCA_900455395.1_43251_H01

♦ Seq 1: UATX01000001.1 Pseudomonas aeruginosa strain NCTC12448 genome assembly, contig: ERS1018592SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 2431443 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1368438-1378881 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 1368438-1369126 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 1368438-1369126 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 1369374-1369937 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1369941-1370969 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1370980-1371963 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1371950-1373254 bp Gene: COG1203:cas3 Type: Type-I Location: 1373312-1376542 bp Gene: cd09718:cas1 Type: universal Location: 1376539-1377513 bp CRISPR array Location: 1377774-1378881 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 1377774-1378881 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1368438-1369126 bp]: array | spacers
           [Locus range 1377774-1378881 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)