CRISPRone

CRISPRone report for GCA_900455415.1_45532_B02

♦ Seq 1: UGUM01000004.1 Pseudomonas aeruginosa strain NCTC13719 genome assembly, contig: ERS1106926SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 6840717 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1306260-1306708 bp 2 Locus 2: 2662681-2672990 bp Zoom in on locus 1 x8 Zoom in on locus 2 x17 x13 CRISPR array Location: 1306260-1306708 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 1306260-1306708 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 2662681-2663669 bp Num of repeats: 17 Spacers: s8-s23 CRISPR array Location: 2662681-2663669 bp Num of repeats: 17 Spacers: s8-s23 Gene: cd09739:cas6f Type: other Location: 2663852-2664415 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2664419-2665447 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2665458-2666441 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2666428-2667732 bp Gene: COG1203:cas3 Type: Type-I Location: 2667790-2671020 bp Gene: cd09718:cas1 Type: universal Location: 2671017-2671991 bp CRISPR array Location: 2672243-2672990 bp Num of repeats: 13 Spacers: s24-s35 CRISPR array Location: 2672243-2672990 bp Num of repeats: 13 Spacers: s24-s35 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1306260-1306708 bp]: array | spacers
           [Locus range 2662681-2663669 bp]: array | spacers
           [Locus range 2672243-2672990 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: UGUM01000002.1 Pseudomonas aeruginosa strain NCTC13719 genome assembly, contig: ERS1106926SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 143902 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 9131-14606 bp Zoom in on locus 1 Gene: cd09707:csf3gr5 Type: Subtype-IV-A Location: 9131-9781 bp Gene: cd09706:csf2gr7 Type: Subtype-IV-A Location: 9788-10831 bp Gene: cd09705:csf1gr8 Type: Subtype-IV-A Location: 10831-11589 bp Gene: mkCas0159:csf5gr6 Type: Subtype-IV-A Location: 11618-12343 bp Gene: cd09708:DinG Type: Subtype-IV-A Location: 12432-14606 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)