CRISPRone

CRISPRone report for GCA_900455425.1_43366_D01

♦ Seq 1: UGUH01000001.1 Pseudomonas aeruginosa strain NCTC10730 genome assembly, contig: ERS1022025SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 6673780 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3037959-3048529 bp Zoom in on locus 1 x15 x8 CRISPR array Location: 3037959-3038842 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 3037959-3038842 bp Num of repeats: 15 Spacers: s1-s14 Gene: pfam09707:cas2 Type: universal Location: 3038907-3039206 bp Gene: cd09719:cas1 Type: universal Location: 3039203-3040093 bp Gene: pfam08798:cas6e Type: other Location: 3040120-3040659 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 3040706-3041368 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 3041370-3042512 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 3042522-3043052 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 3043049-3044617 bp Gene: cd09641:cas3HD Type: Type-I Location: 3044620-3047301 bp CRISPR array Location: 3048074-3048529 bp Num of repeats: 8 Spacers: s15-s21 CRISPR array Location: 3048074-3048529 bp Num of repeats: 8 Spacers: s15-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3037959-3038842 bp]: array | spacers
           [Locus range 3048074-3048529 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)