CRISPRone

CRISPRone report for GCA_900618255.1_paerg002

♦ Seq 1: LR130527.1 Pseudomonas aeruginosa isolate paerg002 genome assembly, chromosome: 0

⇒Summary: seq-len = 6451470 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4607580-4608568 bp 2 Locus 2: 5922545-5932566 bp Zoom in on locus 1 x17 Zoom in on locus 2 x14 x11 CRISPR array Location: 4607580-4608568 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 4607580-4608568 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 5922545-5923353 bp Num of repeats: 14 Spacers: s17-s29 CRISPR array Location: 5922545-5923353 bp Num of repeats: 14 Spacers: s17-s29 Gene: cd09739:cas6f Type: other Location: 5923535-5924098 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 5924102-5925130 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5925141-5926124 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5926111-5927415 bp Gene: COG1203:cas3 Type: Type-I Location: 5927473-5930703 bp Gene: cd09718:cas1 Type: universal Location: 5930700-5931674 bp CRISPR array Location: 5931939-5932566 bp Num of repeats: 11 Spacers: s30-s39 CRISPR array Location: 5931939-5932566 bp Num of repeats: 11 Spacers: s30-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4607580-4608568 bp]: array | spacers
           [Locus range 5922545-5923353 bp]: array | spacers
           [Locus range 5931939-5932566 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)