CRISPRone

CRISPRone report for GCA_900618265.1_paerg004

♦ Seq 1: LR130531.1 Pseudomonas aeruginosa isolate paerg004 genome assembly, chromosome: 0

⇒Summary: seq-len = 6452809 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 124599-134620 bp 2 Locus 2: 5244660-5245648 bp Zoom in on locus 1 x14 x11 Zoom in on locus 2 x17 CRISPR array Location: 124599-125407 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 124599-125407 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 125589-126152 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 126156-127184 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 127195-128178 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 128165-129469 bp Gene: COG1203:cas3 Type: Type-I Location: 129527-132757 bp Gene: cd09718:cas1 Type: universal Location: 132754-133728 bp CRISPR array Location: 133993-134620 bp Num of repeats: 11 Spacers: s14-s23 CRISPR array Location: 133993-134620 bp Num of repeats: 11 Spacers: s14-s23 CRISPR array Location: 5244660-5245648 bp Num of repeats: 17 Spacers: s24-s39 CRISPR array Location: 5244660-5245648 bp Num of repeats: 17 Spacers: s24-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 124599-125407 bp]: array | spacers
           [Locus range 133993-134620 bp]: array | spacers
           [Locus range 5244660-5245648 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)