CRISPRone

CRISPRone report for GCA_900618335.1_paerg012

♦ Seq 1: LR130537.1 Pseudomonas aeruginosa isolate paerg012 genome assembly, chromosome: 0

⇒Summary: seq-len = 6434020 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1493090-1494078 bp 2 Locus 2: 2808105-2818126 bp Zoom in on locus 1 x17 Zoom in on locus 2 x14 x11 CRISPR array Location: 1493090-1494078 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 1493090-1494078 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 2808105-2808913 bp Num of repeats: 14 Spacers: s17-s29 CRISPR array Location: 2808105-2808913 bp Num of repeats: 14 Spacers: s17-s29 Gene: cd09739:cas6f Type: other Location: 2809095-2809658 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2809662-2810690 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2810701-2811684 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2811671-2812975 bp Gene: COG1203:cas3 Type: Type-I Location: 2813033-2816263 bp Gene: cd09718:cas1 Type: universal Location: 2816260-2817234 bp CRISPR array Location: 2817499-2818126 bp Num of repeats: 11 Spacers: s30-s39 CRISPR array Location: 2817499-2818126 bp Num of repeats: 11 Spacers: s30-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1493090-1494078 bp]: array | spacers
           [Locus range 2808105-2808913 bp]: array | spacers
           [Locus range 2817499-2818126 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)