CRISPRone

CRISPRone report for GCA_900636735.1_43941_C01

♦ Seq 1: LR134308.1 Pseudomonas aeruginosa strain NCTC11445 genome assembly, chromosome: 1

⇒Summary: seq-len = 6766292 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2035325-2048165 bp 2 Locus 2: 3937076-3938664 bp Zoom in on locus 1 x28 x44 Zoom in on locus 2 x27 CRISPR array Location: 2035325-2036974 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 2035325-2036974 bp Num of repeats: 28 Spacers: s1-s27 Gene: cd09739:cas6f Type: other Location: 2037156-2037719 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2037723-2038751 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2038762-2039745 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2039732-2041036 bp Gene: COG1203:cas3 Type: Type-I Location: 2041094-2044324 bp Gene: cd09718:cas1 Type: universal Location: 2044321-2045295 bp CRISPR array Location: 2045557-2048165 bp Num of repeats: 44 Spacers: s28-s70 CRISPR array Location: 2045557-2048165 bp Num of repeats: 44 Spacers: s28-s70 CRISPR array Location: 3937076-3938664 bp Num of repeats: 27 Spacers: s71-s96 CRISPR array Location: 3937076-3938664 bp Num of repeats: 27 Spacers: s71-s96 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2035325-2036974 bp]: array | spacers
           [Locus range 2045557-2048165 bp]: array | spacers
           [Locus range 3937076-3938664 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)