CRISPRone

CRISPRone report for GCA_900685905.1_5550_7_5

♦ Seq 1: CAACZF010000018.1 Clostridioides difficile strain LSTM013 genome assembly, contig: ERS017243SCcontig000018, whole genome shotgun sequence

⇒Summary: seq-len = 100426 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44769-45395 bp]: array | spacers
           [Locus range 87015-87110 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAACZF010000010.1 Clostridioides difficile strain LSTM013 genome assembly, contig: ERS017243SCcontig000010, whole genome shotgun sequence

⇒Summary: seq-len = 140771 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113379-114796 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAACZF010000005.1 Clostridioides difficile strain LSTM013 genome assembly, contig: ERS017243SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 236310 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAACZF010000017.1 Clostridioides difficile strain LSTM013 genome assembly, contig: ERS017243SCcontig000017, whole genome shotgun sequence

⇒Summary: seq-len = 111610 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 80633-80926 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAACZF010000003.1 Clostridioides difficile strain LSTM013 genome assembly, contig: ERS017243SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 309499 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 112310-113395 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAACZF010000002.1 Clostridioides difficile strain LSTM013 genome assembly, contig: ERS017243SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 367205 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 296622-297245 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAACZF010000033.1 Clostridioides difficile strain LSTM013 genome assembly, contig: ERS017243SCcontig000033, whole genome shotgun sequence

⇒Summary: seq-len = 16223 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7111-7400 bp]: array | spacers
           [Locus range 9265-9621 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: CAACZF010000004.1 Clostridioides difficile strain LSTM013 genome assembly, contig: ERS017243SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 289100 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 78287-78973 bp]: array | spacers
           [Locus range 287362-288315 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)