CRISPRone

CRISPRone report for GCA_900686955.1_5589_7_8

♦ Seq 1: CAACZI010000068.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000068, whole genome shotgun sequence

⇒Summary: seq-len = 7687 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124-285 bp]: array | spacers
           [Locus range 887-1773 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAACZI010000003.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000003, whole genome shotgun sequence

⇒Summary: seq-len = 324276 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 236420-237042 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAACZI010000136.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000136, whole genome shotgun sequence

⇒Summary: seq-len = 702 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45-671 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAACZI010000010.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000010, whole genome shotgun sequence

⇒Summary: seq-len = 140713 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 133953-135363 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAACZI010000043.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000043, whole genome shotgun sequence

⇒Summary: seq-len = 31434 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAACZI010000002.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 473868 bp; # of CRISPR array = 0; # of cas gene = 11  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAACZI010000162.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000162, whole genome shotgun sequence

⇒Summary: seq-len = 488 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44-399 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: CAACZI010000001.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 480086 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 140508-141128 bp]: array | spacers
           [Locus range 390007-390694 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: CAACZI010000211.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000211, whole genome shotgun sequence

⇒Summary: seq-len = 321 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 208-302 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: CAACZI010000052.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000052, whole genome shotgun sequence

⇒Summary: seq-len = 16404 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 6842-7922 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: CAACZI010000078.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000078, whole genome shotgun sequence

⇒Summary: seq-len = 5726 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1113-1471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: CAACZI010000101.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000101, whole genome shotgun sequence

⇒Summary: seq-len = 1711 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 82-1687 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: CAACZI010000004.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000004, whole genome shotgun sequence

⇒Summary: seq-len = 229724 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 32-855 bp]: array | spacers
           [Locus range 2936-4674 bp]: array | spacers
           [Locus range 179749-180038 bp]: array | spacers
           [Locus range 181903-182259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: CAACZI010000074.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000074, whole genome shotgun sequence

⇒Summary: seq-len = 6580 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2722-3803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: CAACZI010000100.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000100, whole genome shotgun sequence

⇒Summary: seq-len = 1820 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 222-1180 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 16: CAACZI010000014.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000014, whole genome shotgun sequence

⇒Summary: seq-len = 123192 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 83555-84112 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 17: CAACZI010000147.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000147, whole genome shotgun sequence

⇒Summary: seq-len = 550 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 52-345 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 18: CAACZI010000013.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000013, whole genome shotgun sequence

⇒Summary: seq-len = 177048 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 123203-124821 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 19: CAACZI010000005.1 Clostridioides difficile strain Liv050a genome assembly, contig: ERS017211SCcontig000005, whole genome shotgun sequence

⇒Summary: seq-len = 171839 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 48732-48827 bp]: array | spacers
           [Locus range 54324-54550 bp]: array | spacers
           [Locus range 58660-58755 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)