CRISPRone

CRISPRone report for GCA_900687265.1_6437_3_16

♦ Seq 1: CAACZN010000002.1 Clostridioides difficile strain Lei016 genome assembly, contig: ERS032941SCcontig000002, whole genome shotgun sequence

⇒Summary: seq-len = 290002 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 78244-78930 bp]: array | spacers
           [Locus range 287319-288276 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CAACZN010000013.1 Clostridioides difficile strain Lei016 genome assembly, contig: ERS032941SCcontig000013, whole genome shotgun sequence

⇒Summary: seq-len = 125122 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 55353-55976 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CAACZN010000001.1 Clostridioides difficile strain Lei016 genome assembly, contig: ERS032941SCcontig000001, whole genome shotgun sequence

⇒Summary: seq-len = 309230 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 196098-196921 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CAACZN010000006.1 Clostridioides difficile strain Lei016 genome assembly, contig: ERS032941SCcontig000006, whole genome shotgun sequence

⇒Summary: seq-len = 236307 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CAACZN010000017.1 Clostridioides difficile strain Lei016 genome assembly, contig: ERS032941SCcontig000017, whole genome shotgun sequence

⇒Summary: seq-len = 99371 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45156-45782 bp]: array | spacers
           [Locus range 87402-87497 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CAACZN010000012.1 Clostridioides difficile strain Lei016 genome assembly, contig: ERS032941SCcontig000012, whole genome shotgun sequence

⇒Summary: seq-len = 141103 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 25957-27575 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CAACZN010000009.1 Clostridioides difficile strain Lei016 genome assembly, contig: ERS032941SCcontig000009, whole genome shotgun sequence

⇒Summary: seq-len = 149000 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30664-30958 bp]: array | spacers
           [Locus range 123341-123698 bp]: array | spacers
           [Locus range 125562-125852 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)